CDS
| Accession Number | TCMCG011C06016 |
| gbkey | CDS |
| Protein Id | XP_021889948.1 |
| Location | complement(join(114167..114207,118805..119156,119256..119567,119780..119911)) |
| Gene | LOC110808687 |
| GeneID | 110808687 |
| Organism | Carica papaya |
Protein
| Length | 278aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA264084 |
| db_source | XM_022034256.1 |
| Definition | polygalacturonase-like [Carica papaya] |
EGGNOG-MAPPER Annotation
| COG_category | G |
| Description | Contains the following InterPro domains Pectin lyase fold virulence factor (InterPro IPR011050), Pectin lyase fold (InterPro IPR012334), Glycoside hydrolase, family 28 (InterPro IPR000743), Parallel beta-helix repeat (InterPro IPR006626) |
| KEGG_TC | - |
| KEGG_Module |
M00081
[VIEW IN KEGG] |
| KEGG_Reaction |
R01982
[VIEW IN KEGG] R07413 [VIEW IN KEGG] |
| KEGG_rclass |
RC00049
[VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K01213
[VIEW IN KEGG] |
| EC |
3.2.1.67
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00040
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] map00040 [VIEW IN KEGG] map01100 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005576 [VIEW IN EMBL-EBI] GO:0005618 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0030312 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0071944 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCCTCTTTCCAGTTTGAAGCTGTCATCTTCTTCTTCTTCTTCCTCCTGGCATCTAATGCTAATGGTGTTCGAGTTTTTGATGTGACCAAGTATGGTGCAATACCAGGCGGCAAAAGTGATATTAGCCAGGCACTATGTAATGCATTTAAACAAGCATGTGCTTCCACGAGTCCTAGCCAAGTTTTGATTCCCAAAGCCTTATTTGGTTTAGAGCGAGTGATTCTCTATGGTCCTTGCAAGGCTCCTATTGAAATTCGGATTGAAGGCACATTGAAGGGTCCTTCTGCCCCTAAACAATTTCTTGGGCTTGATAATTGGATTAACTTTGGCTATATGGATGGTTTCACATTGAGTGGTAACGGAACCATAGATGGCCAAGGTGCCTCCGCTTGGCCTTACAATGATTGTTCTACAAACTCTAATTGCAAAAAAATTCCCATTAGTATGAGGTTCGATTTCATCAGCAATGGACATGTAACTGGCATAACTTCATTAAATCCTAAATTCTTTCACATCAACGTACTAGGTTGCAAGAATTTTGTTATTGAACACGTGAATACCATTGCTCCTGAGCAAAGCCCCAATACTGATGGAATCCATATTGGTCGATCAAATGGTGTTATTATTGCCAATACAAAAATTTCAACAGGTGATGATTGTATCTCTATTGGTGATGGTACCAAAAACTTGACCATCAAAAGCGTAGATTGTGGACCTGGTCATGGCATTAGCATCGGGAGTTTGGGAAAGTTTGTAGGAGAACAACCAGTAGACTTAATTATCGTACAACATTCGGCTGAAGTAGCCCACCCGAGAGTTGATGCTCTGTCTTAA |
| Protein: MASFQFEAVIFFFFFLLASNANGVRVFDVTKYGAIPGGKSDISQALCNAFKQACASTSPSQVLIPKALFGLERVILYGPCKAPIEIRIEGTLKGPSAPKQFLGLDNWINFGYMDGFTLSGNGTIDGQGASAWPYNDCSTNSNCKKIPISMRFDFISNGHVTGITSLNPKFFHINVLGCKNFVIEHVNTIAPEQSPNTDGIHIGRSNGVIIANTKISTGDDCISIGDGTKNLTIKSVDCGPGHGISIGSLGKFVGEQPVDLIIVQHSAEVAHPRVDALS |